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LOC9266155 5-pentadecatrienyl resorcinol O-methyltransferase [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9266155, updated on 12-Jul-2024

Summary

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Gene symbol
LOC9266155
Gene description
5-pentadecatrienyl resorcinol O-methyltransferase
Locus tag
OSNPB_070463600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1634_H04.122
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Genomic context

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See LOC9266155 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (16479470..16483650, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (16314766..16319011, complement)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase At1g12760 Neighboring gene uncharacterized LOC9270261 Neighboring gene uncharacterized LOC107278770 Neighboring gene acetylserotonin O-methyltransferase 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-pentadecatrienyl resorcinol O-methyltransferase
Names
Os07g0463600
putative o-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    16479470..16483650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015789878.3 → XP_015645364.1  5-pentadecatrienyl resorcinol O-methyltransferase

    UniProtKB/TrEMBL
    A0A0P0X5N4, A3BJI0, Q8LI64
    Conserved Domains (2) summary
    pfam08100
    Location:24 → 73
    Dimerization; Dimerization domain
    cl17173
    Location:139 → 346
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials