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Pnpvgp1 polyprotein [ Perina nuda virus ]

Gene ID: 922254, updated on 15-Aug-2018

Summary

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Gene symbol
Pnpvgp1
Gene description
polyprotein
Locus tag
Pnpvgp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Perina nuda virus
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Iflaviridae; Iflavirus
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Genomic context

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Sequence:
NC_003113.1 (474..9434)

NC_003113.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003113.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete genome sequence of Perina nuda picorna-like virus, an insect-infecting RNA virus with a genome organization similar to that of the mammalian picornaviruses. Wu CY, et al. Virology, 2002 Mar 15. PMID 12009873

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
polyprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003113.1 Reference assembly

    Range
    474..9434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_277061.1 polyprotein [Perina nuda virus]

    See identical proteins and their annotated locations for NP_277061.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q91BL4
    Conserved Domains (4) summary
    cd00205
    Location:694 → 884
    rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
    pfam00910
    Location:1548 → 1655
    RNA_helicase; RNA helicase
    cl02808
    Location:2624 → 2873
    RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
    cl13999
    Location:989 → 1068
    rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
Nucleotide Protein
Heading Accession and Version

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