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ompA outer membrane protein OmpA [ Escherichia coli O157:H7 str. Sakai ]

Gene ID: 917123, updated on 6-Oct-2023

Summary

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Gene symbol
ompA
Gene description
outer membrane protein OmpA
Locus tag
ECs_1041
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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Genomic context

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Sequence:
NC_002695.2 (1148485..1149525, complement)

NC_002695.2Genomic Context describing neighboring genes Neighboring gene beta-hydroxydecanoyl thioester dehydrase Neighboring gene peptidase Neighboring gene Ter macrodomain organizer matS-binding protein Neighboring gene SOS cell division inhibitor Neighboring gene CRP-S-dependent promoter expression factor Neighboring gene transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002695.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biochemical and functional characterization of the periplasmic domain of the outer membrane protein A from enterohemorrhagic Escherichia coli. Wang H, et al. Microbiol Res, 2016 Jan. PMID 26686619
  2. The Escherichia coli O157:H7 cattle immunoproteome includes outer membrane protein A (OmpA), a modulator of adherence to bovine rectoanal junction squamous epithelial (RSE) cells. Kudva IT, et al. Proteomics, 2015 Jun. PMID 25643951, Free PMC Article
  3. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
  4. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
  5. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. C-terminal domain of OmpA is responsible for bacterial resistance to acidic conditions, high osmotic pressure and high SDS. environments
    Title: Biochemical and functional characterization of the periplasmic domain of the outer membrane protein A from enterohemorrhagic Escherichia coli.
  2. OMPA is a modulator of Escherichia coli O157:H7 adherence to bovine rectoanal junction squamous epithelial cells.
    Title: The Escherichia coli O157:H7 cattle immunoproteome includes outer membrane protein A (OmpA), a modulator of adherence to bovine rectoanal junction squamous epithelial (RSE) cells.
Submit: New GeneRIF Correction

General protein information

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Preferred Names
outer membrane protein OmpA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002695.2 Reference assembly

    Range
    1148485..1149525 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_309068.1 outer membrane protein OmpA [Escherichia coli O157:H7 str. Sakai]

    See identical proteins and their annotated locations for NP_309068.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6N8N9G7
    Conserved Domains (1) summary
    PRK10808
    Location:1 → 346
    PRK10808; outer membrane protein A; Reviewed
Nucleotide Protein
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