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rad50 DNA double-strand break repair ATPase Rad50 [ Haloferax volcanii DS2 ]

Gene ID: 8925664, updated on 6-Aug-2024

Summary

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Gene symbol
rad50
Gene description
DNA double-strand break repair ATPase Rad50
Locus tag
HVO_RS08790
Gene type
protein coding
Organism
Haloferax volcanii DS2 (strain: DS2, type-material: type strain of Halobacterium volcanii)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloferacaceae; Haloferax
Old locus tag
HVO_0854
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Genomic context

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Sequence:
NC_013967.1 (766356..769037)

NC_013967.1Genomic Context describing neighboring genes Neighboring gene proteasome-activating nucleotidase Neighboring gene helix-turn-helix domain-containing protein Neighboring gene hypothetical protein Neighboring gene DNA double-strand break repair protein Mre11 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013967.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DNA damage induces nucleoid compaction via the Mre11-Rad50 complex in the archaeon Haloferax volcanii. Delmas S, et al. Mol Microbiol, 2013 Jan. PMID 23145964, Free PMC Article
  2. Mre11-Rad50 promotes rapid repair of DNA damage in the polyploid archaeon Haloferax volcanii by restraining homologous recombination. Delmas S, et al. PLoS Genet, 2009 Jul. PMID 19593371, Free PMC Article
  3. Genome sequence of Halobacterium species NRC-1. Ng WV, et al. Proc Natl Acad Sci U S A, 2000 Oct 24. PMID 11016950, Free PMC Article
  4. The complete genome sequence of Haloferax volcanii DS2, a model archaeon. Hartman AL, et al. PLoS One, 2010 Mar 19. PMID 20333302, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. We observed that nucleoid compaction depends on the Mre11-Rad50 complex, suggesting a link to DNA double-strand break repair.
    Title: DNA damage induces nucleoid compaction via the Mre11-Rad50 complex in the archaeon Haloferax volcanii.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
DNA double-strand break repair ATPase Rad50

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013967.1 Reference assembly

    Range
    766356..769037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_013035478.1 DNA double-strand break repair ATPase Rad50 [Haloferax volcanii]

    See identical proteins and their annotated locations for WP_013035478.1

    UniProtKB/Swiss-Prot
    D4GUK1, P62133
    UniProtKB/TrEMBL
    A0A8T5C5E9, M0GMJ7
    Conserved Domains (1) summary
    PRK02224
    Location:1 → 881
    PRK02224; DNA double-strand break repair Rad50 ATPase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
D4GUK1.1

Gene LinkOut

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