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PA4878 transcriptional regulator [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 882234, updated on 24-Aug-2024

Summary

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Gene symbol
PA4878
Gene description
transcriptional regulator
Locus tag
PA4878
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (5473766..5474578)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene OsmE family transcriptional regulator Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene bacterioferritin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin. Wang F, et al. Nat Commun, 2018 Jul 2. PMID 29967320, Free PMC Article
  2. The MerR-like regulator BrlR confers biofilm tolerance by activating multidrug efflux pumps in Pseudomonas aeruginosa biofilms. Liao J, et al. J Bacteriol, 2013 Aug. PMID 23687276, Free PMC Article
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcriptional regulator
NP_253565.1
  • 'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    5473766..5474578
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_253565.1 transcriptional regulator [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_253565.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9HUT5
    Conserved Domains (2) summary
    cd01107
    Location:2 → 112
    HTH_BmrR; Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator
    COG3708
    Location:120 → 270
    YdeE; Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain [Transcription]
Nucleotide Protein
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