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phzD1 phenazine biosynthesis protein PhzD [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 880504, updated on 11-Sep-2024

Summary

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Gene symbol
phzD1
Gene description
phenazine biosynthesis protein PhzD
Locus tag
PA4213
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4716040..4716663)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene phenazine biosynthesis protein Neighboring gene phenazine biosynthesis protein Neighboring gene phenazine biosynthesis protein PhzC Neighboring gene phenazine biosynthesis protein PhzE Neighboring gene trans-2,3-dihydro-3-hydroxyanthranilate isomerase Neighboring gene pyridoxamine 5'-phosphate oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional analysis of genes for biosynthesis of pyocyanin and phenazine-1-carboxamide from Pseudomonas aeruginosa PAO1. Mavrodi DV, et al. J Bacteriol, 2001 Nov. PMID 11591691, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within phenazine biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
phenazine biosynthesis protein PhzD
NP_252902.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4716040..4716663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252902.1 phenazine biosynthesis protein PhzD [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252902.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    cd01013
    Location:3 → 203
    isochorismatase; Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0DPB9.1
P0DPC1.1

Gene LinkOut

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