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pslF biofilm formation protein PslF [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878020, updated on 14-Nov-2024

Summary

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Gene symbol
pslF
Gene description
biofilm formation protein PslF
Locus tag
PA2236
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (2460283..2461470)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene biofilm formation protein PslB Neighboring gene biofilm formation protein PslC Neighboring gene biofilm formation protein PslD Neighboring gene biofilm formation protein PslE Neighboring gene biofilm formation protein PslG Neighboring gene biofilm formation protein PslH Neighboring gene biofilm formation protein PslI Neighboring gene biofilm formation protein PslJ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and biochemical analyses of the Pseudomonas aeruginosa Psl exopolysaccharide reveal overlapping roles for polysaccharide synthesis enzymes in Psl and LPS production. Byrd MS, et al. Mol Microbiol, 2009 Aug. PMID 19659934, Free PMC Article
  2. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Cantarel BL, et al. Nucleic Acids Res, 2009 Jan. PMID 18838391, Free PMC Article
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within polysaccharide biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within single-species biofilm formation IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
biofilm formation protein PslF
NP_250926.1
  • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    2460283..2461470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_250926.1 biofilm formation protein PslF [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_250926.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9I1N3
    Conserved Domains (1) summary
    cd03822
    Location:2 → 386
    GT4_mannosyltransferase-like; mannosyltransferases of glycosyltransferase family 4 and similar proteins
Nucleotide Protein
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