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psmD11 26S proteasome non-ATPase regulatory subunit 11 [ Dictyostelium discoideum AX4 ]

Gene ID: 8622917, updated on 18-Sep-2024

Summary

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Official Symbol
psmD11
Official Full Name
26S proteasome non-ATPase regulatory subunit 11
Primary source
dictyBase:DDB_G0281315
Locus tag
DDB_G0281315
See related
AmoebaDB:DDB_G0281315; VEuPathDB:DDB_G0281315
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
Old locus tag
DDBDRAFT_0218287; DDBDRAFT_0232994; DDB_0218287; DDB_0232994
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_007089.4 (4153223..4155157)

Chromosome 3 - NC_007089.4Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007089.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. STATc is a key regulator of the transcriptional response to hyperosmotic shock. Na J, et al. BMC Genomics, 2007 May 21. PMID 17517120, Free PMC Article
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables structural molecule activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within hyperosmotic response IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of proteasome complex IEA
Inferred from Electronic Annotation
more info
  
part_of proteasome regulatory particle ISS
Inferred from Sequence or Structural Similarity
more info
  
part_of proteasome regulatory particle, lid subcomplex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
26S proteasome non-ATPase regulatory subunit 11
Names
26S proteasome regulatory subunit S9

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007089.4 Reference assembly

    Range
    4153223..4155157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_635769.1 → XP_640861.1  26S proteasome non-ATPase regulatory subunit 11 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_640861.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54UB5
    Conserved Domains (3) summary
    COG5071
    Location:112 → 383
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
    COG5159
    Location:1 → 412
    RPN6; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
    pfam01399
    Location:276 → 380
    PCI; PCI domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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