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med11 hypothetical protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8622379, updated on 18-Sep-2024

Summary

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Official Symbol
med11
Official Full Name
hypothetical protein
Primary source
dictyBase:DDB_G0280109
Locus tag
DDB_G0280109
See related
AmoebaDB:DDB_G0280109; VEuPathDB:DDB_G0280109
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
Old locus tag
DDBDRAFT_0206383; DDBDRAFT_0266870; DDB_0206383; DDB_0266870
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_007089.4 (2948262..2948693)

Chromosome 3 - NC_007089.4Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene NAK family protein kinase Neighboring gene synaptobrevin domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007089.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics supports a deep evolutionary origin for the large, four-module transcriptional mediator complex. Bourbon HM. Nucleic Acids Res, 2008 Jul. PMID 18515835, Free PMC Article
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables TFIIH-class transcription factor complex binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
part_of core mediator complex ISS
Inferred from Sequence or Structural Similarity
more info
  
part_of mediator complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007089.4 Reference assembly

    Range
    2948262..2948693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_636155.1 → XP_641247.1  hypothetical protein DDB_G0280109 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_641247.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54VV8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials