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ECU11_0140 uncharacterized protein [ Encephalitozoon cuniculi GB-M1 ]

Gene ID: 859971, updated on 17-May-2024

Summary

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Gene symbol
ECU11_0140
Gene description
uncharacterized protein
Primary source
MicrosporidiaDB:ECU11_0140
Locus tag
ECU11_0140
See related
VEuPathDB:ECU11_0140
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Encephalitozoon cuniculi GB-M1 (isolate: GB-M1)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
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Genomic context

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See ECU11_0140 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
1
Sequence:
Chromosome: XI; NC_003237.2 (19297..19923, complement)

Chromosome XI - NC_003237.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003237.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. Peyretaillade E, et al. BMC Genomics, 2009 Dec 15. PMID 20003517, Free PMC Article
  2. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Katinka MD, et al. Nature, 2001 Nov 22. PMID 11719806

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylbase DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_586320.1
  • 11_0140, DNA 3-METHYLADENINE GLYCOSYLASE, 3MGH_BACSU, gene found by Glimmer

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003237.2 Reference assembly

    Range
    19297..19923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001042153.1 → NP_586320.1  uncharacterized protein ECU11_0140 [Encephalitozoon cuniculi GB-M1]

    See identical proteins and their annotated locations for NP_586320.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q8SQI1
    UniProtKB/TrEMBL
    M1KBP7
    Conserved Domains (1) summary
    cd00540
    Location:6 → 189
    AAG; Alkyladenine DNA glycosylase catalyzes the first step in base excision repair
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SQI1.1

Gene LinkOut

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Molecular Biology Databases
Research Materials