U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ECU05_0090 uncharacterized protein [ Encephalitozoon cuniculi GB-M1 ]

Gene ID: 859013, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
ECU05_0090
Gene description
uncharacterized protein
Locus tag
ECU05_0090
See related
MicrosporidiaDB:ECU05_0090; VEuPathDB:ECU05_0090
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Encephalitozoon cuniculi GB-M1 (isolate: GB-M1)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ECU05_0090 in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_003232.1 (17704..18369, complement)

Chromosome V - NC_003232.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003232.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. Peyretaillade E, et al. BMC Genomics, 2009 Dec 15. PMID 20003517, Free PMC Article
  2. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Katinka MD, et al. Nature, 2001 Nov 22. PMID 11719806
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein exit from endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of COPII vesicle coating IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
NP_597349.1
  • 05_0090, ADP RIBOSYLATION FACTOR (ARF) - LIKE GTP BINDING PROTEIN, SAR1_TRIRI, gene found by Glimmer

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003232.1 Reference assembly

    Range
    17704..18369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001041215.1 → NP_597349.1  uncharacterized protein ECU05_0090 [Encephalitozoon cuniculi GB-M1]

    See identical proteins and their annotated locations for NP_597349.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q8SS09
    UniProtKB/TrEMBL
    M1K888
    Conserved Domains (2) summary
    smart00178
    Location:31 → 212
    SAR; Sar1p-like members of the Ras-family of small GTPases
    cl21455
    Location:19 → 212
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SS09.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials