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Cbr-gly-12 Protein CBR-GLY-12 [ Caenorhabditis briggsae ]

Gene ID: 8587045, updated on 10-Oct-2024

Summary

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Gene symbol
Cbr-gly-12
Gene description
Protein CBR-GLY-12
Locus tag
CBG_16700
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See Cbr-gly-12 in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Sequence:
Chromosome: X; NC_013491.2 (13012397..13014477)

Chromosome X - NC_013491.2Genomic Context describing neighboring genes Neighboring gene Protein CBR-MEK-1 Neighboring gene Protein CBG16699 Neighboring gene Protein CBG16701 Neighboring gene Protein CBG16702

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013491.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBR-GLY-12
XP_045096042.1
  • C. briggsae CBR-GLY-12 protein; contains similarity to Pfam domain PF03071 GNT-I family contains similarity to Interpro domain IPR004139 (Glycosyl transferase, family 13);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013491.2 Reference assembly

    Range
    13012397..13014477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045239967.1 → XP_045096042.1  Protein CBR-GLY-12 [Caenorhabditis briggsae]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAE8ZYV9, A8XPM9
    Conserved Domains (1) summary
    cl11394
    Location:70 → 399
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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