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CBG09318 Protein CBG09318 [ Caenorhabditis briggsae ]

Gene ID: 8578856, updated on 10-Oct-2024

Summary

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Gene symbol
CBG09318
Gene description
Protein CBG09318
Locus tag
CBG_09318
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See CBG09318 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_013488.2 (11607129..11609203)

Chromosome V - NC_013488.2Genomic Context describing neighboring genes Neighboring gene Protein CBR-NHR-142 Neighboring gene Protein CBG09319 Neighboring gene Protein CBR-NSTP-3 Neighboring gene Protein CBR-CYN-17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013488.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG09318
XP_002636861.2
  • contains similarity to Pfam domain PF02434 Fringe-like contains similarity to Interpro domain IPR003378 (Fringe-like);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013488.2 Reference assembly

    Range
    11607129..11609203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002636815.2 → XP_002636861.2  Protein CBG09318 [Caenorhabditis briggsae]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAE9D0L8, A8X9D7
    Conserved Domains (1) summary
    cl21608
    Location:226 → 419
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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