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CBG19871 Protein CBG19871 [ Caenorhabditis briggsae ]

Gene ID: 8575829, updated on 6-Jun-2024

Summary

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Gene symbol
CBG19871
Gene description
Protein CBG19871
Locus tag
CBG_19871
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See CBG19871 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
7
Sequence:
Chromosome: IV; NC_013487.2 (6251055..6253429, complement)

Chromosome IV - NC_013487.2Genomic Context describing neighboring genes Neighboring gene Protein CBG19873 Neighboring gene Protein CBG19872 Neighboring gene Protein CBR-NHR-46 Neighboring gene Protein CBG19869

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013487.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG19871
XP_002633833.1
  • contains similarity to Pfam domain PF04991 LicD family contains similarity to Interpro domains IPR007074 (LicD), IPR009644 (Fukutin-related);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013487.2 Reference assembly

    Range
    6251055..6253429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002633787.1 → XP_002633833.1  Protein CBG19871 [Caenorhabditis briggsae]

    See identical proteins and their annotated locations for XP_002633833.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAE9AE02, A8XWM2
Nucleotide Protein
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Gene LinkOut

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