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Cbr-chs-2 Protein CBR-CHS-2 [ Caenorhabditis briggsae ]

Gene ID: 8574110, updated on 10-Oct-2024

Summary

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Gene symbol
Cbr-chs-2
Gene description
Protein CBR-CHS-2
Locus tag
CBG_06966
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See Cbr-chs-2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
12
Sequence:
Chromosome: II; NC_013486.2 (16572799..16579914)

Chromosome II - NC_013486.2Genomic Context describing neighboring genes Neighboring gene Protein CBR-ABU-11 Neighboring gene Protein CBG06967 Neighboring gene Protein CBR-NSTP-4 Neighboring gene Protein CBG06964

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013486.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBR-CHS-2
XP_045093430.1
  • C. briggsae CBR-CHS-2 protein; contains similarity to Pfam domain PF03142 Chitin synthase contains similarity to Interpro domain IPR004835 (Fungal chitin synthase);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013486.2 Reference assembly

    Range
    16572799..16579914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045243253.1 → XP_045093430.1  Protein CBR-CHS-2 [Caenorhabditis briggsae]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8X413
    Conserved Domains (1) summary
    cd04190
    Location:722 → 1055
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin
Nucleotide Protein
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Molecular Biology Databases
Research Materials