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CBG12968 Protein CBG12968 [ Caenorhabditis briggsae ]

Gene ID: 8572045, updated on 6-Jun-2024

Summary

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Gene symbol
CBG12968
Gene description
Protein CBG12968
Locus tag
CBG_12968
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See CBG12968 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_013486.2 (6499359..6500451, complement)

Chromosome II - NC_013486.2Genomic Context describing neighboring genes Neighboring gene Protein CBG12970 Neighboring gene Protein CBG12969 Neighboring gene tRNA Neighboring gene Protein CBG25535 Neighboring gene Protein CBG12966

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013486.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-methyl-5-thioadenosine phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-methionine salvage from methylthioadenosine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleoside metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG12968
XP_002630529.1
  • contains similarity to Pfam domain PF01048 Phosphorylase superfamily contains similarity to Interpro domains IPR018099 (Purine phosphorylase, family 2, conserved site), IPR010044 (Methylthioadenosine phosphorylase), IPR001369 (Purine phosphorylase, family 2), IPR000845 (Nucleoside phosphorylase domain);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013486.2 Reference assembly

    Range
    6499359..6500451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002630483.1 → XP_002630529.1  Protein CBG12968 [Caenorhabditis briggsae]

    See identical proteins and their annotated locations for XP_002630529.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A8XGS6
    UniProtKB/TrEMBL
    A0AAE9DKD3, A0AAE9E9T3
    Conserved Domains (2) summary
    COG0005
    Location:1 → 249
    XapA; Purine nucleoside phosphorylase [Nucleotide transport and metabolism]
    TIGR01694
    Location:3 → 248
    MTAP; 5'-deoxy-5'-methylthioadenosine phosphorylase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8XGS6.1

Gene LinkOut

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