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YAP3 [ Saccharomyces cerevisiae S288C ]

Gene ID: 856377, updated on 22-Aug-2024

Summary

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Official Symbol
YAP3
Primary source
FungiDB:YHL009C
Locus tag
YHL009C
See related
SGD:S000001001; AllianceGenome:SGD:S000001001; VEuPathDB:YHL009C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables DNA-binding transcription factor activity. Involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: VIII
Exon count:
1
Sequence:
Chromosome: VIII; NC_001140.6 (84068..85060, complement)

Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene ribose phosphate diphosphokinase subunit PRS3 Neighboring gene Etp1p Neighboring gene tRNA-Val Neighboring gene gag protein Neighboring gene gag-pol fusion protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001140.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide functional profiling reveals genes required for tolerance to benzene metabolites in yeast. North M, et al. PLoS One, 2011. PMID 21912624, Free PMC Article
  2. Transcriptional Regulatory Networks Involved in C3-C4 Alcohol Stress Response and Tolerance in Yeast. Liang L, et al. ACS Synth Biol, 2021 Jan 15. PMID 33356165
  3. Global analysis of the yeast osmotic stress response by quantitative proteomics. Soufi B, et al. Mol Biosyst, 2009 Nov. PMID 19823750
  4. A systems approach to delineate functions of paralogous transcription factors: role of the Yap family in the DNA damage response. Tan K, et al. Proc Natl Acad Sci U S A, 2008 Feb 26. PMID 18287073, Free PMC Article
  5. Yap, a novel family of eight bZIP proteins in Saccharomyces cerevisiae with distinct biological functions. Fernandes L, et al. Mol Cell Biol, 1997 Dec. PMID 9372930, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription activator activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables sequence-specific DNA binding HDA PubMed 
enables transcription cis-regulatory region binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IC
Inferred by Curator
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Yap3p
NP_011854.1
  • Basic leucine zipper (bZIP) transcription factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001140.6 Reference assembly

    Range
    84068..85060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179089.1 → NP_011854.1  TPA: Yap3p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011854.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D3DKQ4, P38749
    UniProtKB/TrEMBL
    G2WF58
    Conserved Domains (1) summary
    cd14688
    Location:145 → 207
    bZIP_YAP; Basic leucine zipper (bZIP) domain of Yeast Activator Protein (YAP) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38749.1

Gene LinkOut

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