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RTS2 Rts2p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854244, updated on 29-Jun-2024

Summary

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Gene symbol
RTS2
Gene description
Rts2p
Primary source
FungiDB:YOR077W
Locus tag
YOR077W
See related
SGD:S000005603; AllianceGenome:SGD:S000005603; VEuPathDB:YOR077W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable DNA binding activity and zinc ion binding activity. Located in cytoplasm and nucleus. Orthologous to human KIN (Kin17 DNA and RNA binding protein). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RTS2 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (471899..472597)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene Ufe1p Neighboring gene Ski7p Neighboring gene Bud21p Neighboring gene Mn(2+) transporter ATX2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001147.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence of a 54.7 kb fragment of yeast chromosome XV reveals the presence of two tRNAs and 24 new open reading frames. Valens M, et al. Yeast, 1997 Mar 30. PMID 9133743
  2. Exploration of essential gene functions via titratable promoter alleles. Mnaimneh S, et al. Cell, 2004 Jul 9. PMID 15242642
  3. The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity. Goldman A, et al. Mol Cell, 2014 Aug 7. PMID 24930733, Free PMC Article
  4. Transfer of the Septin Ring to Cytokinetic Remnants in ER Stress Directs Age-Sensitive Cell-Cycle Re-entry. Chao JT, et al. Dev Cell, 2019 Oct 21. PMID 31564614, Free PMC Article
  5. Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins. Böhm S, et al. Nucleic Acids Res, 1997 Jun 15. PMID 9171100, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in nucleus HDA PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Rts2p
NP_014720.1
  • Basic zinc-finger protein; similar to human and mouse Kin17 proteins which are chromatin-associated proteins involved in UV response and DNA replication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    471899..472597
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183496.1 → NP_014720.1  TPA: Rts2p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014720.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W2E0, P40962
    UniProtKB/TrEMBL
    A0A6A5Q3Z2, A6ZNS9, G2WMV5, N1NVR9
    Conserved Domains (2) summary
    smart00451
    Location:21 → 55
    ZnF_U1; U1-like zinc finger
    pfam10357
    Location:50 → 137
    Kin17_mid; Domain of Kin17 curved DNA-binding protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40962.1

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