U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 853224, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Full Name
uncharacterized protein
Primary source
SGD:S000003741
Locus tag
YJL206C
See related
AllianceGenome:SGD:S000003741; FungiDB:YJL206C; VEuPathDB:YJL206C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable DNA binding activity; DNA-binding transcription factor activity, RNA polymerase II-specific; and zinc ion binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: X
Exon count:
1
Sequence:
Chromosome: X; NC_001142.9 (47659..49935, complement)

Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene ribonuclease Neighboring gene Laa1p Neighboring gene Nce101p Neighboring gene Rcy1p

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001142.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Complex transcriptional responses to macromolecular damaging agents: regulatory responses specific for SN2 alkylation and the MAG1 gene. Begley TJ, et al. Cold Spring Harb Symp Quant Biol, 2000. PMID 12760054
  2. Dynamic reprogramming of transcription factors to and from the subtelomere. Mak HC, et al. Genome Res, 2009 Jun. PMID 19372386, Free PMC Article
  3. New weakly expressed cell cycle-regulated genes in yeast. de Lichtenberg U, et al. Yeast, 2005 Nov. PMID 16278933
  4. Phenotypic analysis of genes encoding yeast zinc cluster proteins. Akache B, et al. Nucleic Acids Res, 2001 May 15. PMID 11353088, Free PMC Article
  5. Fusion, fission, and transport control asymmetric inheritance of mitochondria and protein aggregates. Böckler S, et al. J Cell Biol, 2017 Aug 7. PMID 28615194, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in biological_process ND
No biological Data available
more info
  
involved_in positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
NP_012329.1
  • hypothetical protein; similar to transcriptional regulators from the Zn[2]-Cys[6] binuclear cluster protein family; mRNA is weakly cell cycle regulated, peaking in S phase; induced rapidly upon MMS treatment

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001142.9 Reference assembly

    Range
    47659..49935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181638.1 → NP_012329.1  TPA: uncharacterized protein YJL206C [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012329.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VVY8, P39529
    UniProtKB/TrEMBL
    C8ZB14, N1P8H4
    Conserved Domains (2) summary
    cd12148
    Location:181 → 614
    fungal_TF_MHR; fungal transcription factor regulatory middle homology region
    pfam00172
    Location:45 → 82
    Zn_clus; Fungal Zn(2)-Cys(6) binuclear cluster domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39529.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools