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PEX31 peroxisome biogenesis protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 852887, updated on 2-Nov-2024

Summary

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Official Symbol
PEX31
Official Full Name
peroxisome biogenesis protein
Primary source
SGD:S000003236
Locus tag
YGR004W
See related
AllianceGenome:SGD:S000003236; FungiDB:YGR004W; VEuPathDB:YGR004W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in peroxisome organization and regulation of peroxisome organization. Located in peroxisomal membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See PEX31 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (502938..504326)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene Swc4p Neighboring gene cullin CUL3 Neighboring gene transcription factor IIF subunit TFG2 Neighboring gene mRNA splicing protein PRP18

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001139.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A family of membrane-shaping proteins at ER subdomains regulates pre-peroxisomal vesicle biogenesis. Joshi AS, et al. J Cell Biol, 2016 Nov 21. PMID 27872254, Free PMC Article
  2. Production of the Fragrance Geraniol in Peroxisomes of a Product-Tolerant Baker's Yeast. Gerke J, et al. Front Bioeng Biotechnol, 2020. PMID 33102464, Free PMC Article
  3. Pex30p, Pex31p, and Pex32p form a family of peroxisomal integral membrane proteins regulating peroxisome size and number in Saccharomyces cerevisiae. Vizeacoumar FJ, et al. Mol Biol Cell, 2004 Feb. PMID 14617799, Free PMC Article
  4. Glc7/protein phosphatase 1 regulatory subunits can oppose the Ipl1/aurora protein kinase by redistributing Glc7. Pinsky BA, et al. Mol Cell Biol, 2006 Apr. PMID 16537909, Free PMC Article
  5. Identification of gene products that control lipid droplet size in yeast using a high-throughput quantitative image analysis. Lv X, et al. Biochim Biophys Acta Mol Cell Biol Lipids, 2019 Feb. PMID 30414449

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in peroxisome organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
  
involved_in peroxisome organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of peroxisome organization IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
located_in endoplasmic reticulum HDA PubMed 
located_in endoplasmic reticulum tubular network ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in peroxisomal membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in peroxisomal membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
  
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
peroxisome biogenesis protein
NP_011518.1
  • Peroxisomal integral membrane protein; involved in negative regulation of peroxisome size; partially functionally redundant with Pex30p and Pex32p; probably acts at a step downstream of steps mediated by Pex28p and Pex29p; PEX31 has a paralog, PEX30, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 Reference assembly

    Range
    502938..504326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181133.1 → NP_011518.1  TPA: peroxisome biogenesis protein [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011518.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VUE1, P53203
    UniProtKB/TrEMBL
    G2WE97, N1P5M8
    Conserved Domains (1) summary
    pfam06398
    Location:51 → 394
    Pex24p; Integral peroxisomal membrane peroxin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53203.1

Gene LinkOut

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