U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCW11 putative glucan endo-1,3-beta-D-glucosidase [ Saccharomyces cerevisiae S288C ]

Gene ID: 852856, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
SCW11
Official Full Name
putative glucan endo-1,3-beta-D-glucosidase
Primary source
SGD:S000002996
Locus tag
YGL028C
See related
AllianceGenome:SGD:S000002996; FungiDB:YGL028C; VEuPathDB:YGL028C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable 1,3-beta-glucanosyltransferase activity and glucan endo-1,3-beta-D-glucosidase activity. Predicted to be involved in cell wall organization. Located in fungal-type cell wall. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SCW11 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (441281..442909, complement)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene Cgr1p Neighboring gene tRNA-Phe Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene tryptophan synthase TRP5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001139.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Disruption of multiple genes whose deletion causes lactic-acid resistance improves lactic-acid resistance and productivity in Saccharomyces cerevisiae. Suzuki T, et al. J Biosci Bioeng, 2013 May. PMID 23290995
  2. The Cbk1p pathway is important for polarized cell growth and cell separation in Saccharomyces cerevisiae. Bidlingmaier S, et al. Mol Cell Biol, 2001 Apr. PMID 11259593, Free PMC Article
  3. A model for cell wall dissolution in mating yeast cells: polarized secretion and restricted diffusion of cell wall remodeling enzymes induces local dissolution. Huberman LB, et al. PLoS One, 2014. PMID 25329559, Free PMC Article
  4. New potential cell wall glucanases of Saccharomyces cerevisiae and their involvement in mating. Cappellaro C, et al. J Bacteriol, 1998 Oct. PMID 9748433, Free PMC Article
  5. Binding assay for incorporation of alkali-extractable proteins in the Saccharomyces cerevisiae cell wall. Teparić R, et al. Yeast, 2007 Apr. PMID 17315268

See all (35) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables glucan endo-1,3-beta-D-glucosidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables glucan endo-1,3-beta-D-glucosidase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in cell wall organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
is_active_in cell surface IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
is_active_in fungal-type cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in fungal-type cell wall IDA
Inferred from Direct Assay
more info
 PubMed 
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
putative glucan endo-1,3-beta-D-glucosidase
NP_011487.3
  • Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on its regulation by Ste12p

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 Reference assembly

    Range
    441281..442909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180893.3 → NP_011487.3  TPA: putative glucan endo-1,3-beta-D-glucosidase [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011487.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VUB0, P53189
    UniProtKB/TrEMBL
    C8Z8L4, N1P9S5
    Conserved Domains (1) summary
    cl23725
    Location:281 → 542
    Glyco_hydro; Glycosyl hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53189.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools