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ssr2 SWI/SNF and RSC complex subunit Ssr2 [ Malassezia japonica ]

Gene ID: 85227976, updated on 6-Jun-2024

Summary

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Gene symbol
ssr2
Gene description
SWI/SNF and RSC complex subunit Ssr2
Locus tag
MJAP1_004325
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Malassezia japonica (strain: CBS 9431, nat-host: Homo sapiens, type-material: type material of Malassezia japonica)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Malasseziomycetes; Malasseziales; Malasseziaceae; Malassezia
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Genomic context

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See ssr2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Sequence:
Chromosome: 9; NC_083378.1 (431325..434313)

Chromosome 9 - NC_083378.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene monovalent cation:H+ antiporter, CPA1 (nhx1) Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083378.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SWI/SNF and RSC complex subunit Ssr2
XP_060124225.1
  • COG:B; EggNog:ENOG503NUCF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_083378.1 Reference assembly

    Range
    431325..434313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060268242.1 → XP_060124225.1  SWI/SNF and RSC complex subunit Ssr2 [Malassezia japonica]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAF0F236
Nucleotide Protein
Heading Accession and Version

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