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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 851825, updated on 2-Nov-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000002647
Locus tag
YDR239C
See related
AllianceGenome:SGD:S000002647; FungiDB:YDR239C; VEuPathDB:YDR239C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (941057..943420, complement)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene mitochondrial 54S ribosomal protein YmL7/YmL5 Neighboring gene coatomer subunit beta Neighboring gene Snu56p Neighboring gene tRNA-Tyr

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001136.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes. Fleischer TC, et al. Genes Dev, 2006 May 15. PMID 16702403, Free PMC Article
  2. Snx4-assisted vacuolar targeting of transcription factors defines a new autophagy pathway for controlling ATG expression. Hanley SE, et al. Autophagy, 2021 Nov. PMID 33678121, Free PMC Article
  3. A Protein-Protein Interaction Analysis Suggests a Wide Range of New Functions for the p21-Activated Kinase (PAK) Ste20. Joshua IM, et al. Int J Mol Sci, 2023 Nov 2. PMID 37958899, Free PMC Article
  4. Bayesian modeling of the yeast SH3 domain interactome predicts spatiotemporal dynamics of endocytosis proteins. Tonikian R, et al. PLoS Biol, 2009 Oct. PMID 19841731, Free PMC Article
  5. AP-3 vesicle uncoating occurs after HOPS-dependent vacuole tethering. Schoppe J, et al. EMBO J, 2020 Oct 15. PMID 32840906, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_010525.1
  • hypothetical protein; may interact with ribosomes, based on co-purification experiments

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    941057..943420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180547.1 → NP_010525.1  TPA: uncharacterized protein YDR239C [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010525.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VSM0, Q03780
    UniProtKB/TrEMBL
    A6ZYJ2, B3LG49, C8Z5F0, N1PAG1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q03780.1

Gene LinkOut

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