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vapB type II toxin-antitoxin system VapB family antitoxin [ Rhizobium ruizarguesonis ]

Gene ID: 84674568, updated on 6-Jun-2024

Summary

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Gene symbol
vapB
Gene description
type II toxin-antitoxin system VapB family antitoxin
Locus tag
J3P73_RS35585
Gene type
protein coding
Organism
Rhizobium ruizarguesonis (strain: NZLR24, nat-host: lentil)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
Old locus tag
J3P73_35585
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Genomic context

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Location:
plasmid: p4

NZ_CP071682.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene type II toxin-antitoxin system VapC family toxin Neighboring gene amidase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP071682.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural Determinants for Antitoxin Identity and Insulation of Cross Talk between Homologous Toxin-Antitoxin Systems. Walling LR, et al. J Bacteriol, 2016 Dec 15. PMID 27672196, Free PMC Article
  2. Enteric virulence associated protein VapC inhibits translation by cleavage of initiator tRNA. Winther KS, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21502523, Free PMC Article
  3. Draft genome of the strain RCAM1026 Rhizobium leguminosarum bv. viciae. Afonin A, et al. Genom Data, 2017 Mar. PMID 28053873, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
type II toxin-antitoxin system VapB family antitoxin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP071682.1 Reference assembly

    Range
    271975..272211
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_018496487.1 MULTISPECIES: type II toxin-antitoxin system VapB family antitoxin [Rhizobium/Agrobacterium group]

    UniProtKB/TrEMBL
    A0A5R9MXR1, A0A6B3KB83, A0A7W5BRB0, A0A7W6UNS6, A0A9Q3QY07, A0AAE4YW73
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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