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USP32 ubiquitin specific peptidase 32 [ Homo sapiens (human) ]

Gene ID: 84669, updated on 7-Apr-2024

Summary

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Official Symbol
USP32provided by HGNC
Official Full Name
ubiquitin specific peptidase 32provided by HGNC
Primary source
HGNC:HGNC:19143
See related
Ensembl:ENSG00000170832 MIM:607740; AllianceGenome:HGNC:19143
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
USP10; NY-REN-60
Summary
Enables thiol-dependent deubiquitinase. Predicted to be involved in protein deubiquitination. Located in Golgi apparatus and cytosol. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in testis (RPKM 36.8), brain (RPKM 14.5) and 23 other tissues See more
Orthologs
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Genomic context

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See USP32 in Genome Data Viewer
Location:
17q23.1-q23.2
Exon count:
40
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (60177327..60422416, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (61046275..61291441, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (58254688..58469494, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100996660 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12525 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12526 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:58216417-58216950 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:58217485-58218018 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:58218675-58219231 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:58219938-58220447 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:58232505-58233005 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:58235149-58235978 Neighboring gene Sharpr-MPRA regulatory region 8996 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12527 Neighboring gene carbonic anhydrase 4 Neighboring gene family with sequence similarity 106 member D, pseudogene Neighboring gene small Cajal body-specific RNA 20 Neighboring gene ribosomal protein L32 pseudogene 32 Neighboring gene septin 7 pseudogene 12 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12528 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8787 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:58402707-58402860 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:58405017-58405863 Neighboring gene H3 histone pseudogene 42 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:58462897-58463708 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:58469209-58470050 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12529 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12530 Neighboring gene uncharacterized LOC105371850 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8791 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8792 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8793 Neighboring gene ribosomal protein L12 pseudogene 38 Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 42 Neighboring gene CHD1 helical C-terminal domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Identification of ubiquitin-specific protease 32 as an oncogene in glioblastoma and the underlying mechanisms. Chen S, et al. Sci Rep, 2022 Apr 19. PMID 35440702, Free PMC Article
  2. Downregulation of USP32 inhibits cell proliferation, migration and invasion in human small cell lung cancer. Hu W, et al. Cell Prolif, 2017 Aug. PMID 28597490, Free PMC Article
  3. Roles of the hsa_circ_0013880/USP32/Rap1b axis in the proliferation and apoptosis of acute myeloid leukemia cells. Zhang H, et al. Acta Biochim Biophys Sin (Shanghai), 2023 Mar 25. PMID 36951484, Free PMC Article
  4. Deubiquitylation of Rab35 by USP32 promotes the transmission of imatinib resistance by enhancing exosome secretion in gastrointestinal stromal tumours. Li C, et al. Oncogene, 2023 Mar. PMID 36725886
  5. USP32 confers cancer cell resistance to YM155 via promoting ER-associated degradation of solute carrier protein SLC35F2. Chandrasekaran AP, et al. Theranostics, 2021. PMID 34815782, Free PMC Article

See all (43) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. High USP32 expression contributes to cancer progression and is correlated with immune infiltrates in hepatocellular carcinoma.
    Title: High USP32 expression contributes to cancer progression and is correlated with immune infiltrates in hepatocellular carcinoma.
  2. Roles of the hsa_circ_0013880/USP32/Rap1b axis in the proliferation and apoptosis of acute myeloid leukemia cells.
    Title: Roles of the hsa_circ_0013880/USP32/Rap1b axis in the proliferation and apoptosis of acute myeloid leukemia cells.
  3. Deubiquitylation of Rab35 by USP32 promotes the transmission of imatinib resistance by enhancing exosome secretion in gastrointestinal stromal tumours.
    Title: Deubiquitylation of Rab35 by USP32 promotes the transmission of imatinib resistance by enhancing exosome secretion in gastrointestinal stromal tumours.
  4. Identification of ubiquitin-specific protease 32 as an oncogene in glioblastoma and the underlying mechanisms.
    Title: Identification of ubiquitin-specific protease 32 as an oncogene in glioblastoma and the underlying mechanisms.
  5. USP32 confers cancer cell resistance to YM155 via promoting ER-associated degradation of solute carrier protein SLC35F2.
    Title: USP32 confers cancer cell resistance to YM155 via promoting ER-associated degradation of solute carrier protein SLC35F2.
  6. USP32 promotes tumorigenesis and chemoresistance in gastric carcinoma via upregulation of SMAD2.
    Title: USP32 promotes tumorigenesis and chemoresistance in gastric carcinoma via upregulation of SMAD2.
  7. Ubiquitin specific peptidase 32 acts as an oncogene in epithelial ovarian cancer by deubiquitylating farnesyl-diphosphate farnesyltransferase 1.
    Title: Ubiquitin specific peptidase 32 acts as an oncogene in epithelial ovarian cancer by deubiquitylating farnesyl-diphosphate farnesyltransferase 1.
  8. the small GTPase Rab7-the logistical centerpiece of late endosome biology-is a substrate of USP32.
    Title: USP32 regulates late endosomal transport and recycling through deubiquitylation of Rab7.
  9. USP32 silencing arrested cell cycle progression at G0/G1 phase via decreasing CDK4/Cyclin D1 complex and elevating p21.
    Title: Downregulation of USP32 inhibits cell proliferation, migration and invasion in human small cell lung cancer.
  10. USP32 is overexpressed in breast cancer.
    Title: USP32 is an active, membrane-bound ubiquitin protease overexpressed in breast cancers.
Submit: New GeneRIF Correction See all GeneRIFs (11)

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables cysteine-type deubiquitinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables cysteine-type deubiquitinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of TORC1 signaling IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein deubiquitination TAS
Traceable Author Statement
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
  

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 32
Names
deubiquitinating enzyme 32
renal carcinoma antigen NY-REN-60
ubiquitin specific protease 32
ubiquitin thioesterase 32
ubiquitin thiolesterase 32
ubiquitin-specific-processing protease 32
NP_115971.2
XP_011523673.1
XP_011523674.1
XP_011523675.1
XP_011523676.1
XP_011523677.1
XP_011523678.1
XP_011523680.1
XP_011523681.1
XP_016880722.1
XP_047292899.1
XP_047292900.1
XP_047292901.1
XP_054173541.1
XP_054173542.1
XP_054173543.1
XP_054173544.1
XP_054173545.1
XP_054173546.1
XP_054173547.1
XP_054173548.1
XP_054173549.1
XP_054173550.1
XP_054173551.1
XP_054173552.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032582.4 → NP_115971.2  ubiquitin carboxyl-terminal hydrolase 32

    See identical proteins and their annotated locations for NP_115971.2

    Status: VALIDATED

    Source sequence(s)
    AC025048, AF533230, AL834444, BI459907
    Consensus CDS
    CCDS32697.1
    UniProtKB/Swiss-Prot
    Q7Z5T3, Q8NFA0, Q9BX85, Q9Y591
    Related
    ENSP00000300896.3, ENST00000300896.9
    Conserved Domains (6) summary
    COG5560
    Location:518 → 1316
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd00051
    Location:237 → 293
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl02553
    Location:1225 → 1565
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:519 → 586
    DUSP; DUSP domain
    pfam13499
    Location:236 → 293
    EF-hand_7; EF-hand domain pair
    pfam14836
    Location:623 → 710
    Ubiquitin_3; Ubiquitin-like domain

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    60177327..60422416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011525372.2 → XP_011523674.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X2

    Conserved Domains (6) summary
    COG5560
    Location:534 → 1332
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd00051
    Location:253 → 309
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl02553
    Location:1241 → 1581
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:535 → 602
    DUSP; DUSP domain
    pfam13499
    Location:252 → 309
    EF-hand_7; EF-hand domain pair
    pfam14836
    Location:639 → 726
    Ubiquitin_3; Ubiquitin-like domain

  2. XM_011525371.2 → XP_011523673.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X1

    Conserved Domains (6) summary
    COG5560
    Location:534 → 1346
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd00051
    Location:253 → 309
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl02553
    Location:1255 → 1595
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:535 → 602
    DUSP; DUSP domain
    pfam13499
    Location:252 → 309
    EF-hand_7; EF-hand domain pair
    pfam14836
    Location:653 → 740
    Ubiquitin_3; Ubiquitin-like domain

  3. XM_011525376.2 → XP_011523678.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X6

    Conserved Domains (6) summary
    COG5560
    Location:515 → 1313
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd00051
    Location:234 → 290
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl02553
    Location:1222 → 1562
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:516 → 583
    DUSP; DUSP domain
    pfam13499
    Location:233 → 290
    EF-hand_7; EF-hand domain pair
    pfam14836
    Location:620 → 707
    Ubiquitin_3; Ubiquitin-like domain

  4. XM_011525374.2 → XP_011523676.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X4

    Conserved Domains (6) summary
    COG5560
    Location:515 → 1327
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd00051
    Location:234 → 290
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl02553
    Location:1236 → 1576
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:516 → 583
    DUSP; DUSP domain
    pfam13499
    Location:233 → 290
    EF-hand_7; EF-hand domain pair
    pfam14836
    Location:634 → 721
    Ubiquitin_3; Ubiquitin-like domain

  5. XM_011525373.2 → XP_011523675.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X3

    Conserved Domains (6) summary
    COG5560
    Location:518 → 1330
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd00051
    Location:237 → 293
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl02553
    Location:1239 → 1579
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:519 → 586
    DUSP; DUSP domain
    pfam13499
    Location:236 → 293
    EF-hand_7; EF-hand domain pair
    pfam14836
    Location:637 → 724
    Ubiquitin_3; Ubiquitin-like domain

  6. XM_011525375.2 → XP_011523677.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X5

    Conserved Domains (6) summary
    COG5560
    Location:508 → 1320
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd00051
    Location:227 → 283
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl02553
    Location:1229 → 1569
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:509 → 576
    DUSP; DUSP domain
    pfam13499
    Location:226 → 283
    EF-hand_7; EF-hand domain pair
    pfam14836
    Location:627 → 714
    Ubiquitin_3; Ubiquitin-like domain

  7. XM_047436943.1 → XP_047292899.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X7

  8. XM_047436944.1 → XP_047292900.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X10

  9. XM_017025233.2 → XP_016880722.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X9

    UniProtKB/TrEMBL
    K7EQL6

  10. XM_011525378.2 → XP_011523680.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X8

    UniProtKB/TrEMBL
    K7EQL6
    Conserved Domains (6) summary
    COG5560
    Location:472 → 1284
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd00051
    Location:191 → 247
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl02553
    Location:1193 → 1533
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:473 → 540
    DUSP; DUSP domain
    pfam13499
    Location:190 → 247
    EF-hand_7; EF-hand domain pair
    pfam14836
    Location:591 → 678
    Ubiquitin_3; Ubiquitin-like domain

  11. XM_011525379.4 → XP_011523681.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X11

    UniProtKB/TrEMBL
    K7EQL6
    Conserved Domains (4) summary
    COG5560
    Location:227 → 1039
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cl02553
    Location:948 → 1288
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:228 → 295
    DUSP; DUSP domain
    pfam14836
    Location:346 → 433
    Ubiquitin_3; Ubiquitin-like domain

  12. XM_047436945.1 → XP_047292901.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X12

    Related
    ENSP00000467885.1, ENST00000592339.5

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    61046275..61291441 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054317567.1 → XP_054173542.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X2

  2. XM_054317566.1 → XP_054173541.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X1

  3. XM_054317571.1 → XP_054173546.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X6

  4. XM_054317569.1 → XP_054173544.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X4

  5. XM_054317568.1 → XP_054173543.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X3

  6. XM_054317570.1 → XP_054173545.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X5

  7. XM_054317572.1 → XP_054173547.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X7

  8. XM_054317575.1 → XP_054173550.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X10

  9. XM_054317574.1 → XP_054173549.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X9

  10. XM_054317573.1 → XP_054173548.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X8

  11. XM_054317576.1 → XP_054173551.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X11

  12. XM_054317577.1 → XP_054173552.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X12

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8NFA0.1 GenPept UniProtKB/Swiss-Prot:Q8NFA0

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