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BGAL17 beta-galactosidase 17 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843630, updated on 18-Sep-2024

Summary

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Official Symbol
BGAL17
Official Full Name
beta-galactosidase 17
Primary source
TAIR:AT1G72990
Locus tag
AT1G72990
See related
Araport:AT1G72990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
beta-galactosidase 17; F3N23.19; F3N23_19
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Genomic context

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See BGAL17 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
19
Sequence:
Chromosome: 1; NC_003070.9 (27457266..27462487, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene LOB domain-containing protein 7 Neighboring gene PYR1-like 3 Neighboring gene inorganic pyrophosphatase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036196.2
NM_001334559.1
NM_001334560.1
NM_105957.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
beta-galactosidase 17
NP_001031273.1
  • beta-galactosidase 17 (BGAL17); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_565051.1
  • beta-galactosidase 17 (BGAL17); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.2); Has 2090 Blast hits to 2034 proteins in 466 species: Archae - 15; Bacteria - 876; Metazoa - 411; Fungi - 209; Plants - 521; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27457266..27462487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105957.3 → NP_565051.1  beta-galactosidase 17 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565051.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V4C9, Q93Z24, Q9SSM8
    UniProtKB/TrEMBL
    A0A178WKK4, A0A5S9WTW9, A0A654EQ60
    Conserved Domains (2) summary
    pfam01301
    Location:69 → 394
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:601 → 665
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  2. NM_001036196.2 → NP_001031273.1  beta-galactosidase 17 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031273.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WKK4
    Conserved Domains (2) summary
    pfam01301
    Location:24 → 332
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:539 → 603
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  3. NM_001334560.1 → NP_001321343.1  beta-galactosidase 17 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V4C9, Q93Z24, Q9SSM8
    UniProtKB/TrEMBL
    A0A178WKK4, A0A5S9WTW9, A0A654EQ60

  4. NM_001334559.1 → NP_001321344.1  beta-galactosidase 17 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WKK4, A0A1P8AQM6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q93Z24.1

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