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ZBTB7C-AS2 ZBTB7C antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 84322, updated on 5-Mar-2024

Summary

Official Symbol
ZBTB7C-AS2provided by HGNC
Official Full Name
ZBTB7C antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:24918
See related
Ensembl:ENSG00000280197 AllianceGenome:HGNC:24918
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HEIL1; HsT2508; C18orf12
Orthologs
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Genomic context

Location:
18q21.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (48252301..48252837)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (48443436..48443972)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (45778672..45779208)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372101 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr18:45494112-45494840 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:45499951-45500451 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:45529319-45530518 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:45534013-45534926 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45580577-45581077 Neighboring gene zinc finger and BTB domain containing 7C Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr18:45605776-45606698 Neighboring gene Sharpr-MPRA regulatory region 9251 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:45654098-45654696 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45665409-45665908 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9431 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45698538-45699038 Neighboring gene ZBTB7C antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45712074-45712592 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45712593-45713110 Neighboring gene RNA, U6 small nuclear 708, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45819913-45820696 Neighboring gene Sharpr-MPRA regulatory region 937 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45822263-45823044 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr18:45844425-45844926 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45860940-45861440 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:45861441-45861941 Neighboring gene uncharacterized LOC124904352 Neighboring gene uncharacterized LOC124904353

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study in Han Chinese identifies three novel loci for human height.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_172886.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC091150
    Related
    ENST00000623329.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    48252301..48252837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    48443436..48443972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001350280.1: Suppressed sequence

    Description
    NM_001350280.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  2. NM_032362.1: Suppressed sequence

    Description
    NM_032362.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.