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CSLE1 cellulose synthase like E1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842035, updated on 18-Sep-2024

Summary

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Official Symbol
CSLE1
Official Full Name
cellulose synthase like E1
Primary source
TAIR:AT1G55850
Locus tag
AT1G55850
See related
Araport:AT1G55850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCSLE1; cellulose synthase like E1; F14J16.9; F14J16_9
Summary
encodes a protein similar to cellulose synthase
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Genomic context

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See CSLE1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (20876440..20879482)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase, putative (DUF1296) Neighboring gene coiled-coil protein Neighboring gene Sec14p-like phosphatidylinositol transfer family protein Neighboring gene LOW protein: E3 ubiquitin ligase-like protein Neighboring gene ncRNA Neighboring gene ubiquitin-protein ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
  2. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
  3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_104462.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
  
enables cellulose synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  
located_in endoplasmic reticulum HDA PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
cellulose synthase like E1
NP_175981.2
  • cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20876440..20879482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104462.4 → NP_175981.2  cellulose synthase like E1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175981.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q56X66, Q8VZK9, Q9LG28
    UniProtKB/TrEMBL
    A0A178W3Y0, A0A5S9WQ20, W8PVZ2
    Conserved Domains (2) summary
    PLN02893
    Location:16 → 719
    PLN02893; Cellulose synthase-like protein
    cl11394
    Location:109 → 493
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8VZK9.1

Gene LinkOut

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