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EFE ethylene-forming enzyme [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839345, updated on 7-Sep-2023

Summary

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Gene symbol
EFE
Gene description
ethylene-forming enzyme
Primary source
Araport:AT1G05010
Locus tag
AT1G05010
See related
TAIR:AT1G05010
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE; ACO4; EAT1; ethylene forming enzyme; ethylene-forming enzyme; ETHYLENE-FORMING ENZYME; T7A14.12; T7A14_12
Summary
Encodes 1-aminocyclopropane-1-carboxylate oxidase
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Genomic context

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See EFE in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (1431177..1433010, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Phosphotyrosine protein phosphatases superfamily protein Neighboring gene PPR containing protein Neighboring gene ncRNA Neighboring gene ENTH/ANTH/VHS superfamily protein Neighboring gene Major facilitator superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and characterization of a gene involved in ethylene biosynthesis from Arabidopsis thaliana. Gómez-Lim MA, et al. Gene, 1993 Dec 8. PMID 8262380
  2. Brassinosteroids signaling via BZR1 down-regulates expression of ACC oxidase 4 to control growth of Arabidopsis thaliana seedlings. Moon J, et al. Plant Signal Behav, 2020 Apr 2. PMID 32114884, Free PMC Article
  3. Fusarium oxysporum hijacks COI1-mediated jasmonate signaling to promote disease development in Arabidopsis. Thatcher LF, et al. Plant J, 2009 Jun. PMID 19220788
  4. Genes involved in biosynthesis and signalisation of ethylene in Brassica oleracea and Arabidopsis thaliana: identification and genome comparative mapping of specific gene homologues. Babula D, et al. Theor Appl Genet, 2006 Feb. PMID 16311726
  5. Saturated very-long-chain fatty acids promote cotton fiber and Arabidopsis cell elongation by activating ethylene biosynthesis. Qin YM, et al. Plant Cell, 2007 Nov. PMID 17993622, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Brassinosteroids signaling via BZR1 down-regulates expression of ACC oxidase 4 to control growth of Arabidopsis thaliana seedlings.
    Title: Brassinosteroids signaling via BZR1 down-regulates expression of ACC oxidase 4 to control growth of Arabidopsis thaliana seedlings.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_100380.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-aminocyclopropane-1-carboxylate oxidase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to fatty acid IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in ethylene biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within ethylene biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within ethylene biosynthetic process TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within response to fungus IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytoplasmic stress granule IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol HDA PubMed 
located_in extracellular region HDA PubMed 

General protein information

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Preferred Names
ethylene-forming enzyme
NP_171994.1
  • ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1431177..1433010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100380.4 → NP_171994.1  ethylene-forming enzyme [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171994.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q06588, Q94K94, Q9S9K8
    UniProtKB/TrEMBL
    A0A178WHU2, A0A5S9SNR3
    Conserved Domains (1) summary
    PLN02299
    Location:1 → 323
    PLN02299; 1-aminocyclopropane-1-carboxylate oxidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q06588.2

Gene LinkOut

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