LpxC1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: LpxC1
Official Full Name: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Primary source: TAIR:AT1G24793
Locus tag: AT1G24793
See related: Araport:AT1G24793
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: AtLpxC1; F5A9.18; lipid X C1
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Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

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NM_001332665.1

NM_102312.3

Function	Evidence Code	Pubs
enables UDP-3-O-acyl-N-acetylglucosamine deacetylase activity	IEA Inferred from Electronic Annotation more info
enables UDP-3-O-acyl-N-acetylglucosamine deacetylase activity	IMP Inferred from Mutant Phenotype more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within lipid X metabolic process	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in lipid X metabolic process	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in mitochondrion	IDA Inferred from Direct Assay more info	PubMed

Preferred Names: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein

NP_001319076.1

UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G25210.2); Has 5025 Blast hits to 5025 proteins in 1409 species: Archae - 0; Bacteria - 2975; Metazoa - 1; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 1994 (source: NCBI BLink).

NP_173874.2

UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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The following sections contain reference sequences that belong to a specific genome build. Explain