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AT1G19025 DNA repair metallo-beta-lactamase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838484, updated on 7-Sep-2023

Summary

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Gene symbol
AT1G19025
Gene description
DNA repair metallo-beta-lactamase family protein
Primary source
Araport:AT1G19025
Locus tag
AT1G19025
See related
TAIR:AT1G19025
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See AT1G19025 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (6568674..6570939)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myosin-binding protein, putative (Protein of unknown function, DUF593) Neighboring gene Homeodomain-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase Neighboring gene pseudo Neighboring gene NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001332383.1
NM_101760.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DNA repair metallo-beta-lactamase family protein
NP_564070.1
  • DNA repair metallo-beta-lactamase family protein; CONTAINS InterPro DOMAIN/s: DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: DNA repair metallo-beta-lactamase family protein (TAIR:AT1G27410.1); Has 1078 Blast hits to 1060 proteins in 342 species: Archae - 34; Bacteria - 280; Metazoa - 259; Fungi - 220; Plants - 166; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6568674..6570939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332382.1 → NP_001321878.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ASD8, Q8LCG8

  2. NM_101760.2 → NP_564070.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564070.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654ED26, A0A7G2DXA4, F4IDZ7
    Conserved Domains (2) summary
    pfam07522
    Location:232 → 347
    DRMBL; DNA repair metallo-beta-lactamase
    cl23716
    Location:7 → 159
    metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

  3. NM_001332383.1 → NP_001321877.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ASA0
Nucleotide Protein
Heading Accession and Version

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