U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

myosin-binding protein, putative (Protein of unknown function, DUF593) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838480, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
myosin-binding protein, putative (Protein of unknown function, DUF593)
Primary source
TAIR:AT1G18990
Locus tag
AT1G18990
See related
Araport:AT1G18990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14D16.14; F14D16_14
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (6558574..6560561, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene germin-like protein 4 Neighboring gene RmlC-like cupins superfamily protein Neighboring gene Homeodomain-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase Neighboring gene DNA repair metallo-beta-lactamase family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Lipid droplets in Arabidopsis thaliana leaves contain myosin-binding proteins and enzymes associated with furan-containing fatty acid biosynthesis. Omata Y, et al. Front Plant Sci, 2024. PMID 38495375, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_101756.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables myosin XI tail binding IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in lipid droplet IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
myosin-binding protein, putative (Protein of unknown function, DUF593)
NP_173333.1
  • Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G74830.1); Has 1377 Blast hits to 1217 proteins in 215 species: Archae - 6; Bacteria - 79; Metazoa - 450; Fungi - 121; Plants - 429; Viruses - 14; Other Eukaryotes - 278 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6558574..6560561 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101756.3 → NP_173333.1  myosin-binding protein, putative (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173333.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LMC8
    UniProtKB/TrEMBL
    A0A178W468, A0A5S9V530, A0A654EBW5, A0A7G2DTY7
    Conserved Domains (2) summary
    TIGR02168
    Location:312 → 497
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam04576
    Location:303 → 391
    Zein-binding
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LMC8.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools