U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCAMP2 Secretory carrier membrane protein (SCAMP) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837659, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
SCAMP2
Official Full Name
Secretory carrier membrane protein (SCAMP) family protein
Primary source
TAIR:AT1G11180
Locus tag
AT1G11180
See related
Araport:AT1G11180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtSCAMP2; Secretory carrier membrane protein 2; T28P6.15; T28P6_15
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SCAMP2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Sequence:
Chromosome: 1; NC_003070.9 (3745774..3748557)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene lysine ketoglutarate reductase trans-splicing-like protein (DUF707) Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene bifunctional nuclease i

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_001331971.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Secretory carrier membrane protein (SCAMP) family protein
NP_001318980.1
  • Secretory carrier membrane protein (SCAMP) family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1).
NP_172584.1
  • Secretory carrier membrane protein (SCAMP) family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1); Has 667 Blast hits to 665 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 14; Plants - 226; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    3745774..3748557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100990.4 → NP_172584.1  Secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172584.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SXA5
    UniProtKB/TrEMBL
    A0A654EJJ5
    Conserved Domains (1) summary
    pfam04144
    Location:101 → 272
    SCAMP; SCAMP family

  2. NM_001331972.1 → NP_001320599.1  Secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ANB7, A0A654EJJ5

  3. NM_001331971.1 → NP_001318980.1  Secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EJJ5, F4I7E4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SXA5.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.