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GolS3 galactinol synthase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837457, updated on 18-Sep-2024

Summary

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Official Symbol
GolS3
Official Full Name
galactinol synthase 3
Primary source
TAIR:AT1G09350
Locus tag
AT1G09350
See related
Araport:AT1G09350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtGolS3; F14J9.1; F14J9_1; galactinol synthase 3
Summary
Predicted to encode a galactinol synthase
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Genomic context

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See GolS3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (3019639..3021443)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene plant/protein (Protein of unknown function, DUF538) Neighboring gene agenet domain-containing protein Neighboring gene golgi apparatus membrane protein-like protein ECHIDNA protein Neighboring gene chloroplast RNA binding protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis. Kwon CS, et al. Plant J, 2009 Oct. PMID 19500304
  2. Important roles of drought- and cold-inducible genes for galactinol synthase in stress tolerance in Arabidopsis thaliana. Taji T, et al. Plant J, 2002 Feb. PMID 11846875
  3. Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A. Maruyama K, et al. Plant Physiol, 2009 Aug. PMID 19502356, Free PMC Article
  4. Galactinol and raffinose constitute a novel function to protect plants from oxidative damage. Nishizawa A, et al. Plant Physiol, 2008 Jul. PMID 18502973, Free PMC Article
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Trimethylation of histone H3 at lysine 27 decreases at COR15A and ATGOLS3 during cold-induced transcription.
    Title: Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis.
Submit: New GeneRIF Correction

General gene information

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NM_001331831.1
NM_100805.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables inositol 3-alpha-galactosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables inositol 3-alpha-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in galactose metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within response to cold IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to cold IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to oxidative stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
galactinol synthase 3
NP_172406.1
  • galactinol synthase 3 (GolS3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1260 Blast hits to 1259 proteins in 288 species: Archae - 0; Bacteria - 98; Metazoa - 258; Fungi - 282; Plants - 479; Viruses - 73; Other Eukaryotes - 70 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    3019639..3021443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100805.2 → NP_172406.1  galactinol synthase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172406.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80518
    UniProtKB/TrEMBL
    A0A5S9TF89, A0A654E850, W8PVD7
    Conserved Domains (1) summary
    PLN00176
    Location:1 → 334
    PLN00176; galactinol synthase

  2. NM_001331831.1 → NP_001320559.1  galactinol synthase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AN71
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80518.1

Gene LinkOut

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