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Fstl3 follistatin-like 3 [ Mus musculus (house mouse) ]

Gene ID: 83554, updated on 2-Nov-2024

Summary

Official Symbol
Fstl3provided by MGI
Official Full Name
follistatin-like 3provided by MGI
Primary source
MGI:MGI:1890391
See related
Ensembl:ENSMUSG00000020325 AllianceGenome:MGI:1890391
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Flrg; E030038F23Rik
Summary
Enables activin binding activity. Acts upstream of or within negative regulation of BMP signaling pathway. Located in extracellular space. Is expressed in several structures, including brain; foregut; limb; male reproductive gland or organ; and thymus. Orthologous to human FSTL3 (follistatin like 3). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in placenta adult (RPKM 82.3), lung adult (RPKM 26.4) and 14 other tissues See more
Orthologs
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Genomic context

See Fstl3 in Genome Data Viewer
Location:
10 C1; 10 39.72 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (79613108..79618464)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (79777274..79782630)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 22 Neighboring gene ring finger protein 126 Neighboring gene STARR-positive B cell enhancer ABC_E899 Neighboring gene STARR-positive B cell enhancer ABC_E719 Neighboring gene serine protease 57 Neighboring gene paralemmin Neighboring gene predicted gene, 40713 Neighboring gene mitotic spindle positioning

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (8)  1 citation

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables activin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables activin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables activin binding ISO
Inferred from Sequence Orthology
more info
 
enables fibronectin binding IEA
Inferred from Electronic Annotation
more info
 
enables fibronectin binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in hematopoietic progenitor cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in hematopoietic progenitor cell differentiation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within negative regulation of BMP signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of BMP signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of activin receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of activin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of activin receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of osteoclast differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of osteoclast differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of BMP signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space HDA PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in neuron projection terminus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in secretory granule ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
follistatin-related protein 3
Names
follistatin-like protein 3
follistatin-related gene protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_031380.2NP_113557.1  follistatin-related protein 3 precursor

    See identical proteins and their annotated locations for NP_113557.1

    Status: VALIDATED

    Source sequence(s)
    AK079286, AK082898, BC061052, BQ840331
    Consensus CDS
    CCDS23990.1
    UniProtKB/Swiss-Prot
    Q9EQC7
    UniProtKB/TrEMBL
    Q542M9
    Related
    ENSMUSP00000020575.5, ENSMUST00000020575.5
    Conserved Domains (2) summary
    smart00280
    Location:132165
    KAZAL; Kazal type serine protease inhibitors
    cl00097
    Location:169229
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    79613108..79618464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)