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Smp_124020 putative heparan sulfate 6-o-sulfotransferase [ Schistosoma mansoni ]

Gene ID: 8348367, updated on 16-Nov-2023

Summary

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Gene symbol
Smp_124020
Gene description
putative heparan sulfate 6-o-sulfotransferase
Locus tag
Smp_124020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schistosoma mansoni (strain: Puerto Rico)
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_031495.1 (7727342..7758831)

Chromosome 1 - NC_031495.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene hypothetical protein Neighboring gene tRNA Neighboring gene tRNA Neighboring gene putative homeobox protein otx

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031495.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

gap

  • Loc: 7741128-7741327 estimated_length = 200

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative heparan sulfate 6-o-sulfotransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031495.1 Reference assembly

    Range
    7727342..7758831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018793132.1 → XP_018647675.1  putative heparan sulfate 6-o-sulfotransferase [Schistosoma mansoni]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G4V6N7
Protein Accession Links
GenPept Link UniProtKB Link
CCD74800.1

Gene LinkOut

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Molecular Biology Databases