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Pias2 protein inhibitor of activated STAT, 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 83422, updated on 10-Oct-2024

Summary

Official Symbol
Pias2provided by RGD
Official Full Name
protein inhibitor of activated STAT, 2provided by RGD
Primary source
RGD:71056
See related
EnsemblRapid:ENSRNOG00000017493 AllianceGenome:RGD:71056
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
DIP; Miz1; ARIP3; PiasX
Summary
Enables nuclear receptor binding activity and protein domain specific binding activity. Involved in several processes, including androgen receptor signaling pathway; positive regulation of dendrite morphogenesis; and response to testosterone. Acts upstream of or within regulation of androgen receptor signaling pathway. Located in nucleus. Orthologous to human PIAS2 (protein inhibitor of activated STAT 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Testes (RPKM 242.6), Adrenal (RPKM 191.0) and 9 other tissues See more
Orthologs
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Genomic context

See Pias2 in Genome Data Viewer
Location:
18q12.3
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (72883008..72989486)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (70608034..70714295)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (73479863..73524956)

Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120098312 Neighboring gene uncharacterized LOC134483057 Neighboring gene immediate early response 3 interacting protein 1 Neighboring gene haloacid dehalogenase-like hydrolase domain containing 2 Neighboring gene katanin catalytic subunit A1 like 2 Neighboring gene uncharacterized LOC102552068 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 Neighboring gene uncharacterized LOC102551787 Neighboring gene lipoxygenase homology PLAT domains 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II-specific DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase II-specific DNA-binding transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
enables SUMO ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables SUMO ligase activity IEA
Inferred from Electronic Annotation
more info
 
enables SUMO ligase activity ISO
Inferred from Sequence Orthology
more info
 
enables SUMO transferase activity ISO
Inferred from Sequence Orthology
more info
 
enables nuclear androgen receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables nuclear estrogen receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables nuclear glucocorticoid receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein domain specific binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables transcription coregulator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 
enables ubiquitin protein ligase binding ISO
Inferred from Sequence Orthology
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
NOT involved_in SMAD protein signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in androgen receptor signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of DNA-binding transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of androgen receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of androgen receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of dendrite morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein sumoylation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein sumoylation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein sumoylation ISO
Inferred from Sequence Orthology
more info
 
involved_in protein sumoylation ISO
Inferred from Sequence Orthology
more info
 
involved_in protein sumoylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within regulation of androgen receptor signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of macromolecule metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in response to testosterone IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in spermatogenesis IEP
Inferred from Expression Pattern
more info
PubMed 
NOT involved_in transforming growth factor beta receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in PML body IEA
Inferred from Electronic Annotation
more info
 
located_in PML body ISO
Inferred from Sequence Orthology
more info
 
located_in PML body ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in chromatin IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
E3 SUMO-protein ligase PIAS2
Names
DAB2-interacting protein
E3 SUMO-protein transferase PIAS2
androgen receptor-interacting protein 3
msx-interacting-zinc finger protein
protein inhibitor of activated STAT x
NP_001380693.1
NP_445789.2
XP_038953070.2
XP_038953071.2
XP_038953072.1
XP_038953073.2
XP_038953074.2
XP_038953075.1
XP_038953077.1
XP_038953079.2
XP_038953080.2
XP_038953081.2
XP_038953082.2
XP_038953083.2
XP_063133673.1
XP_063133674.1
XP_063133675.1
XP_063133676.1
XP_063133677.1
XP_063133678.1
XP_063133679.1
XP_063133680.1
XP_063133681.1
XP_063133682.1
XP_063133683.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001393764.1NP_001380693.1  E3 SUMO-protein ligase PIAS2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000018
    UniProtKB/TrEMBL
    A6KMU4
    Related
    ENSRNOP00000109402.1, ENSRNOT00000145398.1
    Conserved Domains (3) summary
    smart00513
    Location:1145
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    cd16790
    Location:343390
    SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
    pfam14324
    Location:147296
    PINIT; PINIT domain
  2. NM_053337.2NP_445789.2  E3 SUMO-protein ligase PIAS2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000018
    UniProtKB/Swiss-Prot
    Q6AZ28, Q9Z177
    UniProtKB/TrEMBL
    A6KMU1
    Related
    ENSRNOP00000086650.2, ENSRNOT00000110007.2
    Conserved Domains (3) summary
    smart00513
    Location:1145
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    cd16790
    Location:343390
    SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
    pfam14324
    Location:147296
    PINIT; PINIT domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086036.1 Reference GRCr8

    Range
    72883008..72989486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039097146.2XP_038953074.2  E3 SUMO-protein ligase PIAS2 isoform X7

  2. XM_039097154.2XP_038953082.2  E3 SUMO-protein ligase PIAS2 isoform X11

  3. XM_063277603.1XP_063133673.1  E3 SUMO-protein ligase PIAS2 isoform X1

  4. XM_039097142.2XP_038953070.2  E3 SUMO-protein ligase PIAS2 isoform X2

  5. XM_039097143.2XP_038953071.2  E3 SUMO-protein ligase PIAS2 isoform X3

  6. XM_039097152.2XP_038953080.2  E3 SUMO-protein ligase PIAS2 isoform X11

  7. XM_039097151.2XP_038953079.2  E3 SUMO-protein ligase PIAS2 isoform X11

  8. XM_039097153.2XP_038953081.2  E3 SUMO-protein ligase PIAS2 isoform X11

  9. XM_039097145.2XP_038953073.2  E3 SUMO-protein ligase PIAS2 isoform X6

  10. XM_039097155.2XP_038953083.2  E3 SUMO-protein ligase PIAS2 isoform X12

  11. XM_063277604.1XP_063133674.1  E3 SUMO-protein ligase PIAS2 isoform X5

    UniProtKB/TrEMBL
    A0A8I6A470
    Related
    ENSRNOP00000103276.1, ENSRNOT00000129444.1
  12. XM_063277606.1XP_063133676.1  E3 SUMO-protein ligase PIAS2 isoform X13

    Related
    ENSRNOP00000023886.6, ENSRNOT00000023886.7
  13. XM_039097144.2XP_038953072.1  E3 SUMO-protein ligase PIAS2 isoform X4

    UniProtKB/TrEMBL
    A6KMU4
    Conserved Domains (3) summary
    smart00513
    Location:4175
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    cd16790
    Location:373420
    SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
    pfam14324
    Location:177326
    PINIT; PINIT domain
  14. XM_063277609.1XP_063133679.1  E3 SUMO-protein ligase PIAS2 isoform X16

    UniProtKB/TrEMBL
    A0A8I6GLW8
  15. XM_039097147.2XP_038953075.1  E3 SUMO-protein ligase PIAS2 isoform X8

    UniProtKB/TrEMBL
    A6KMU4
    Conserved Domains (3) summary
    smart00513
    Location:1145
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    cd16790
    Location:343390
    SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
    pfam14324
    Location:147296
    PINIT; PINIT domain
  16. XM_063277607.1XP_063133677.1  E3 SUMO-protein ligase PIAS2 isoform X14

  17. XM_063277611.1XP_063133681.1  E3 SUMO-protein ligase PIAS2 isoform X18

  18. XM_063277612.1XP_063133682.1  E3 SUMO-protein ligase PIAS2 isoform X19

  19. XM_063277605.1XP_063133675.1  E3 SUMO-protein ligase PIAS2 isoform X10

    UniProtKB/TrEMBL
    A0A8I6GK87
    Related
    ENSRNOP00000092581.1, ENSRNOT00000107723.2
  20. XM_063277608.1XP_063133678.1  E3 SUMO-protein ligase PIAS2 isoform X15

  21. XM_039097149.2XP_038953077.1  E3 SUMO-protein ligase PIAS2 isoform X9

    UniProtKB/TrEMBL
    A6KMU2, A6KMU4
    Conserved Domains (3) summary
    smart00513
    Location:438
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    cd16790
    Location:336383
    SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
    pfam14324
    Location:140289
    PINIT; PINIT domain
  22. XM_063277610.1XP_063133680.1  E3 SUMO-protein ligase PIAS2 isoform X17

    UniProtKB/TrEMBL
    A6KMU3
  23. XM_063277613.1XP_063133683.1  E3 SUMO-protein ligase PIAS2 isoform X20