U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GSL09 glucan synthase-like 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833654, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
GSL09
Official Full Name
glucan synthase-like 9
Primary source
TAIR:AT5G36870
Locus tag
AT5G36870
See related
Araport:AT5G36870
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATGSL09; atgsl9; F5H8.14; F5H8_14; glucan synthase-like 9; gsl09
Summary
encodes a gene similar to callose synthase
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GSL09 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
42
Sequence:
Chromosome: 5; NC_003076.8 (14518008..14534060)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene acetyl-CoA synthetase Neighboring gene beta glucosidase 42

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A user-friendly platform for yeast two-hybrid library screening using next generation sequencing. Erffelinck ML, et al. PLoS One, 2018. PMID 30576311, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
  
enables 1,3-beta-D-glucan synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
glucan synthase-like 9
NP_198503.3
  • glucan synthase-like 9 (GSL09); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: shoot apex, petal, root, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    14518008..14534060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001344151.1 → NP_001329982.1  glucan synthase-like 9 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9E7, A0A5S9Y8I9

  2. NM_001344150.1 → NP_001329981.1  glucan synthase-like 9 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9B7, A0A5S9Y8I9

  3. NM_001344152.1 → NP_001329979.1  glucan synthase-like 9 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9B7, A0A5S9Y8I9

  4. NM_123045.4 → NP_198503.3  glucan synthase-like 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198503.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LTG5
    UniProtKB/TrEMBL
    A0A5S9Y8I9
    Conserved Domains (2) summary
    pfam02364
    Location:985 → 1695
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:329 → 440
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  5. NM_001344153.1 → NP_001329980.1  glucan synthase-like 9 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9D3, A0A5S9Y8I9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LTG5.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.