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CYP79A3P cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833580, updated on 18-Sep-2024

Summary

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Official Symbol
CYP79A3P
Official Full Name
cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene
Primary source
TAIR:AT5G35917
Locus tag
AT5G35917
See related
Araport:AT5G35917
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''cytochrome P450; cytochrome P450; family 79; polypeptide 3 pseudogene; polypeptide 3 pseudogene''; subfamily A
Summary
a pseudogene with cytochrome P450 domain
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Genomic context

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See CYP79A3P in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (14049123..14051128)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene cytochrome P450, family 79, subfamily A, polypeptide 4 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene
NP_680351.1
  • ''cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene'' (CYP79A3P); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 79a2 (TAIR:AT5G05260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    14049123..14051128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_148046.1 → NP_680351.1  cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_680351.1

    Status: REVIEWED

    Conserved Domains (1) summary
    cl41757
    Location:78 → 483
    cytochrome_P450; cytochrome P450 (CYP) superfamily
Nucleotide Protein
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