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GolS5 galactinol synthase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832444, updated on 18-Sep-2024

Summary

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Official Symbol
GolS5
Official Full Name
galactinol synthase 5
Primary source
TAIR:AT5G23790
Locus tag
AT5G23790
See related
Araport:AT5G23790
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtGolS5; galactinol synthase 5; MRO11.17; MRO11_17
Summary
Predicted to encode a galactinol synthase.
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Genomic context

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See GolS5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (8019953..8021650, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Copper transport protein family Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 8) Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 9) Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 10) Neighboring gene amino acid permease 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_122284.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables inositol 3-alpha-galactosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in galactose metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
galactinol synthase 5
NP_197768.1
  • galactinol synthase 5 (GolS5); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 6 (TAIR:AT4G26250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    8019953..8021650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122284.2 → NP_197768.1  galactinol synthase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197768.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FFA1
    UniProtKB/TrEMBL
    A0A5S9Y6M4
    Conserved Domains (2) summary
    PLN00176
    Location:1 → 333
    PLN00176; galactinol synthase
    COG1442
    Location:109 → 269
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FFA1.1

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