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Toc90 Avirulence induced gene (AIG1) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832152, updated on 18-Sep-2024

Summary

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Official Symbol
Toc90
Official Full Name
Avirulence induced gene (AIG1) family protein
Primary source
TAIR:AT5G20300
Locus tag
AT5G20300
See related
Araport:AT5G20300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5O24.190; F5O24_190; translocon at the outer envelope membrane of chloroplasts 90
Summary
Encodes Toc90, part of the TOC (translocon at the outer chloroplast membrane) machinery involved in the import of nucleus-encoded proteins into the chloroplast.
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Genomic context

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See Toc90 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (6853299..6856981, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene sucrose phosphate synthase 1F Neighboring gene Ribosomal protein S8e family protein Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene dicer-like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional specialization amongst the Arabidopsis Toc159 family of chloroplast protein import receptors. Kubis S, et al. Plant Cell, 2004 Aug. PMID 15273297, Free PMC Article
  2. The chloroplast import receptor Toc90 partially restores the accumulation of Toc159 client proteins in the Arabidopsis thaliana ppi2 mutant. Infanger S, et al. Mol Plant, 2011 Mar. PMID 21220583
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036834.1
NM_001036835.1
NM_001343650.1
NM_001343651.1
NM_122037.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein targeting to chloroplast IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in intracellular anatomical structure IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Avirulence induced gene (AIG1) family protein
NP_001031912.1
  • Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 979 Blast hits to 964 proteins in 184 species: Archae - 2; Bacteria - 204; Metazoa - 369; Fungi - 41; Plants - 292; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
NP_001318609.1
  • Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 993 Blast hits to 978 proteins in 186 species: Archae - 2; Bacteria - 206; Metazoa - 376; Fungi - 41; Plants - 292; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
NP_197530.2
  • Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 993 Blast hits to 978 proteins in 186 species: Archae - 2; Bacteria - 206; Metazoa - 376; Fungi - 41; Plants - 292; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    6853299..6856981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122037.4 → NP_197530.2  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197530.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V361, Q6S5G3
    UniProtKB/TrEMBL
    A0A178UFT9
    Conserved Domains (4) summary
    cd01853
    Location:136 → 384
    Toc34_like; Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like)
    TIGR00993
    Location:54 → 772
    3a0901s04IAP86; chloroplast protein import component Toc86/159, G and M domains
    pfam11886
    Location:506 → 773
    TOC159_MAD; Translocase of chloroplast 159/132, membrane anchor domain
    pfam13476
    Location:419 → 504
    AAA_23; AAA domain

  2. NM_001343650.1 → NP_001318609.1  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V361, Q6S5G3
    UniProtKB/TrEMBL
    A0A178UFT9

  3. NM_001343651.1 → NP_001329949.1  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V361, Q6S5G3
    UniProtKB/TrEMBL
    A0A178UFT9

  4. NM_001036835.1 → NP_001031912.1  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031912.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UFT9, F4K480
    Conserved Domains (3) summary
    cd01853
    Location:8 → 256
    Toc34_like; Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like)
    pfam11886
    Location:378 → 645
    TOC159_MAD; Translocase of chloroplast 159/132, membrane anchor domain
    pfam13476
    Location:291 → 376
    AAA_23; AAA domain

  5. NM_001036834.1 → NP_001031911.1  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031911.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V361, Q6S5G3
    UniProtKB/TrEMBL
    A0A178UFT9
    Conserved Domains (4) summary
    cd01853
    Location:136 → 384
    Toc34_like; Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like)
    TIGR00993
    Location:54 → 772
    3a0901s04IAP86; chloroplast protein import component Toc86/159, G and M domains
    pfam11886
    Location:506 → 773
    TOC159_MAD; Translocase of chloroplast 159/132, membrane anchor domain
    pfam13476
    Location:419 → 504
    AAA_23; AAA domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6S5G3.1

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