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UGP2 UDP-glucose pyrophosphorylase 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831596, updated on 18-Sep-2024

Summary

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Official Symbol
UGP2
Official Full Name
UDP-glucose pyrophosphorylase 2
Primary source
TAIR:AT5G17310
Locus tag
AT5G17310
See related
Araport:AT5G17310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtUGP2; MKP11.26; MKP11_26; UDP-glucose pyrophosphorylase 2; UDP-GLUCOSE PYROPHOSPHORYLASE 2
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Genomic context

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See UGP2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Sequence:
Chromosome: 5; NC_003076.8 (5696478..5700993, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene oxidoreductase-like protein, amino-terminal protein Neighboring gene autophagy protein Apg5 family Neighboring gene Homeodomain-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene homeodomain GLABROUS 9 Neighboring gene glutamate decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. UDP-glucose pyrophosphorylase is rate limiting in vegetative and reproductive phases in Arabidopsis thaliana. Park JI, et al. Plant Cell Physiol, 2010 Jun. PMID 20435647
  2. UDP-glucose pyrophosphorylase is not rate limiting, but is essential in Arabidopsis. Meng M, et al. Plant Cell Physiol, 2009 May. PMID 19366709
  3. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
  4. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001343490.1
NM_001343491.1
NM_001343492.1
NM_001343493.1
NM_121737.4
NM_180506.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables UTP:glucose-1-phosphate uridylyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in UDP-glucose metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within callose deposition in cell wall IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within pollen development IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 
located_in plasma membrane HDA PubMed 
located_in plastid HDA PubMed 

General protein information

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Preferred Names
UDP-glucose pyrophosphorylase 2
NP_197233.1
  • UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
NP_850837.1
  • UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618), Hantavirus nucleocapsid protein (InterPro:IPR002214); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1116 Blast hits to 1112 proteins in 411 species: Archae - 0; Bacteria - 382; Metazoa - 242; Fungi - 229; Plants - 150; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5696478..5700993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121737.4 → NP_197233.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197233.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P57751, Q3E9G5
    UniProtKB/TrEMBL
    A0A178UCA6, A0A5S9Y772, A0A654G1T1
    Conserved Domains (1) summary
    PLN02474
    Location:2 → 470
    PLN02474; UTP--glucose-1-phosphate uridylyltransferase

  2. NM_001343492.1 → NP_001330921.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KGY8

  3. NM_001343491.1 → NP_001330920.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BC93
    Conserved Domains (1) summary
    cl11394
    Location:1 → 336
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. NM_001343490.1 → NP_001330919.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BC98

  5. NM_001343493.1 → NP_001330922.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BC93
    Conserved Domains (1) summary
    cl11394
    Location:1 → 336
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  6. NM_180506.2 → NP_850837.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850837.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KGY8
    Conserved Domains (1) summary
    cl11394
    Location:20 → 390
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P57751.1

Gene LinkOut

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