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N7525_004465 uncharacterized protein [ Penicillium rubens ]

Gene ID: 8313550, updated on 31-Oct-2024

Summary

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Gene symbol
N7525_004465
Gene description
uncharacterized protein
Locus tag
N7525_004465
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Penicillium rubens (strain: IBT 27055, culture-collection: IBT:27055)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium; Penicillium chrysogenum species complex
Old locus tag
Pc22g18920
Orthologs
Aspergillus fumigatus all
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Genomic context

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See N7525_004465 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_026890600.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026890600.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic study of the Penicillium genus elucidates a diverse pangenome and 15 lateral gene transfer events. Petersen C, et al. IMA Fungus, 2023 Feb 1. PMID 36726175, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U3 snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_061070046.1
  • Utp13 specific WD40 associated domain; WD domain G-beta repeat

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026890600.1 Reference assembly

    Range
    5192780..5195813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061213025.1 → XP_061070046.1  uncharacterized protein N7525_004465 [Penicillium rubens]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version

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