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Leucine-rich receptor-like protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830865, updated on 18-Sep-2024

Summary

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Official Full Name
Leucine-rich receptor-like protein kinase family protein
Primary source
TAIR:AT5G10020
Locus tag
AT5G10020
See related
Araport:AT5G10020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
SIRK1; sucrose-induced receptor kinase 1; T31P16.10; T31P16_10
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (3133244..3137242)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene myosin-H heavy protein Neighboring gene ferredoxin 4 Neighboring gene TGACG motif-binding factor 4 Neighboring gene uncharacterized protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene ENTH/VHS family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sucrose-induced Receptor Kinase 1 is Modulated by an Interacting Kinase with Short Extracellular Domain. Wu XN, et al. Mol Cell Proteomics, 2019 Aug. PMID 31147492, Free PMC Article
  2. Sucrose-induced receptor kinase SIRK1 regulates a plasma membrane aquaporin in Arabidopsis. Wu XN, et al. Mol Cell Proteomics, 2013 Oct. PMID 23820729, Free PMC Article
  3. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Smakowska-Luzan E, et al. Nature, 2018 Jan 18. PMID 29320478, Free PMC Article
  4. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
  5. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001085093.2
NM_121040.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose mediated signaling IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane HDA PubMed 
is_active_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Leucine-rich receptor-like protein kinase family protein
NP_001078562.1
  • Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G27060.1); Has 139678 Blast hits to 85602 proteins in 3004 species: Archae - 100; Bacteria - 15783; Metazoa - 35548; Fungi - 4368; Plants - 70555; Viruses - 172; Other Eukaryotes - 13152 (source: NCBI BLink).
NP_196564.1
  • Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G27060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3133244..3137242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121040.4 → NP_196564.1  Leucine-rich receptor-like protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196564.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WR59, Q8VYQ5, Q9LEA2
    UniProtKB/TrEMBL
    A0A178UAG9, A0A384L7P5, A0A7G2FDL7, C0LGT0
    Conserved Domains (2) summary
    PLN00113
    Location:26 → 1047
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:80 → 100
    LRR_RI; leucine-rich repeat [structural motif]

  2. NM_001085093.2 → NP_001078562.1  Leucine-rich receptor-like protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078562.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2FDL7
    Conserved Domains (4) summary
    PLN00113
    Location:26 → 999
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    cd00116
    Location:119 → 329
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:80 → 100
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:726 → 998
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0WR59.2

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