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RBOHA respiratory burst oxidase homolog A [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830630, updated on 18-Sep-2024

Summary

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Official Symbol
RBOHA
Official Full Name
respiratory burst oxidase homolog A
Primary source
TAIR:AT5G07390
Locus tag
AT5G07390
See related
Araport:AT5G07390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATRBOHA; respiratory burst oxidase homolog A; T2I1.100; T2I1_100
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Genomic context

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See RBOHA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Sequence:
Chromosome: 5; NC_003076.8 (2335895..2339913, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene TUDOR-SN protein 1 Neighboring gene Amidase family protein Neighboring gene inositol polyphosphate kinase 2 alpha Neighboring gene uncharacterized protein Neighboring gene forkhead-associated domain-containing protein / FHA domain-containing protein Neighboring gene Pectin lyase-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A plant homolog of the neutrophil NADPH oxidase gp91phox subunit gene encodes a plasma membrane protein with Ca2+ binding motifs. Keller T, et al. Plant Cell, 1998 Feb. PMID 9490748, Free PMC Article
  2. Six Arabidopsis thaliana homologues of the human respiratory burst oxidase (gp91phox). Torres MA, et al. Plant J, 1998 May. PMID 9628030
  3. Production of reactive oxygen species by plant NADPH oxidases. Sagi M, et al. Plant Physiol, 2006 Jun. PMID 16760484, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001203321.1
NM_120821.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within defense response TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
respiratory burst oxidase homolog A
NP_001190250.1
  • respiratory burst oxidase homolog A (RBOHA); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: NADPH/respiratory burst oxidase protein D (TAIR:AT5G51060.1).
NP_196356.1
  • respiratory burst oxidase homolog A (RBOHA); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: NADPH/respiratory burst oxidase protein D (TAIR:AT5G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2335895..2339913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120821.2 → NP_196356.1  respiratory burst oxidase homolog A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196356.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81209, Q9LY21
    UniProtKB/TrEMBL
    A0A178UJR0, A0A5S9Y2H2, A0A654FZ83
    Conserved Domains (4) summary
    pfam01794
    Location:391 → 539
    Ferric_reduct; Ferric reductase like transmembrane component
    pfam08022
    Location:583 → 701
    FAD_binding_8; FAD-binding domain
    pfam08030
    Location:707 → 884
    NAD_binding_6; Ferric reductase NAD binding domain
    pfam08414
    Location:129 → 223
    NADPH_Ox; Respiratory burst NADPH oxidase

  2. NM_001203321.1 → NP_001190250.1  respiratory burst oxidase homolog A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190250.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2F5V5, F4K6P2
    Conserved Domains (4) summary
    pfam01794
    Location:359 → 507
    Ferric_reduct; Ferric reductase like transmembrane component
    pfam08022
    Location:551 → 669
    FAD_binding_8; FAD-binding domain
    pfam08030
    Location:675 → 837
    NAD_binding_6; Ferric reductase NAD binding domain
    pfam08414
    Location:129 → 223
    NADPH_Ox; Respiratory burst NADPH oxidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O81209.2

Gene LinkOut

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