U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BEE2 BR enhanced expression 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829806, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
BEE2
Official Full Name
BR enhanced expression 2
Primary source
TAIR:AT4G36540
Locus tag
AT4G36540
See related
Araport:AT4G36540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AP22.3; AP22_3; BR enhanced expression 2
Summary
Encodes the brassinosteroid signaling component BEE2 (BR-ENHANCED EXPRESSION 2). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BEE2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (17243583..17245296)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ARM repeat superfamily protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Antagonistic regulation of growth and immunity by the Arabidopsis basic helix-loop-helix transcription factor homolog of brassinosteroid enhanced expression2 interacting with increased leaf inclination1 binding bHLH1. Malinovsky FG, et al. Plant Physiol, 2014 Mar. PMID 24443525, Free PMC Article
  2. The bHLH proteins BEE and BIM positively modulate the shade avoidance syndrome in Arabidopsis seedlings. Cifuentes-Esquivel N, et al. Plant J, 2013 Sep. PMID 23763263
  3. LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins. Husbands A, et al. Nucleic Acids Res, 2007. PMID 17913740, Free PMC Article
  4. Cell elongation is regulated through a central circuit of interacting transcription factors in the Arabidopsis hypocotyl. Oh E, et al. Elife, 2014 May 27. PMID 24867218, Free PMC Article
  5. The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Heim MA, et al. Mol Biol Evol, 2003 May. PMID 12679534

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_119817.3
NM_179177.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within negative regulation of innate immune response IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
BR enhanced expression 2
NP_195372.1
  • BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.2); Has 2056 Blast hits to 2048 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 31; Plants - 2000; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
NP_849508.1
  • BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17243583..17245296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119817.3 → NP_195372.1  BR enhanced expression 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195372.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23226, Q3E9Q1, Q6YJU3, Q8LF81, Q8S3E4, Q93VJ4, Q940I6
    UniProtKB/TrEMBL
    A0A178URK0, A0A5S9XZ71
    Conserved Domains (1) summary
    cd18919
    Location:137 → 222
    bHLH_AtBPE_like; basic helix-loop-helix (bHLH) domain found in Arabidopsis thaliana BIG PETAL (BPE) and similar proteins

  2. NM_179177.2 → NP_849508.1  BR enhanced expression 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849508.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XZ71
    Conserved Domains (1) summary
    smart00353
    Location:153 → 202
    HLH; helix loop helix domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q93VJ4.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.