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phosphatidylinositolglycan-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829705, updated on 18-Sep-2024

Summary

Official Full Name
phosphatidylinositolglycan-like protein
Primary source
TAIR:AT4G35530
Locus tag
AT4G35530
See related
Araport:AT4G35530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F8D20.40; F8D20_40
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Genomic context

Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (16871734..16873722, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PHD finger-like protein Neighboring gene uncharacterized protein Neighboring gene MUTL protein homolog 3 Neighboring gene ncRNA Neighboring gene POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 Neighboring gene WUSCHEL related homeobox 13

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_119718.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
phosphatidylinositolglycan-like protein
NP_195278.2
  • phosphatidylinositolglycan-related; CONTAINS InterPro DOMAIN/s: GPI-GlcNAc transferase complex, PIG-H component (InterPro:IPR019328); Has 106 Blast hits to 106 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 13; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16871734..16873722 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119718.6NP_195278.2  phosphatidylinositolglycan-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195278.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FVV8, O81786, Q8VY53
    Conserved Domains (1) summary
    pfam10181
    Location:94157
    PIG-H; GPI-GlcNAc transferase complex, PIG-H component