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CTRG_04790 trehalose-phosphatase [ Candida tropicalis MYA-3404 ]

Gene ID: 8296499, updated on 17-May-2024

Summary

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Gene symbol
CTRG_04790
Gene description
trehalose-phosphatase
Locus tag
CTRG_04790
See related
FungiDB:CTRG_04790; VEuPathDB:CTRG_04790
Gene type
protein coding
RNA name
trehalose-phosphatase
RefSeq status
PROVISIONAL
Organism
Candida tropicalis MYA-3404 (strain: MYA-3404)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CTRG_04790 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_003020058.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene polyadenylate-binding protein Neighboring gene chromo domain protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003020058.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Butler G, et al. Nature, 2009 Jun 4. PMID 19465905, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trehalose-phosphatase
XP_002550492.1
  • Candida DB at Institut Pasteur CTRG_04790

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003020058.1 Reference assembly

    Range
    1130323..1132992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002550446.1 → XP_002550492.1  trehalose-phosphatase [Candida tropicalis MYA-3404]

    See identical proteins and their annotated locations for XP_002550492.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5MFE7
    Conserved Domains (1) summary
    PRK14501
    Location:78 → 830
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Protein Accession Links
GenPept Link UniProtKB Link
EER32007.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials