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KLTH0F10252g KLTH0F10252p [ Lachancea thermotolerans CBS 6340 ]

Gene ID: 8292858, updated on 21-Dec-2023

Summary

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Gene symbol
KLTH0F10252g
Gene description
KLTH0F10252p
Locus tag
KLTH0F10252g
Gene type
protein coding
RNA name
KLTH0F10252p
RefSeq status
PROVISIONAL
Organism
Lachancea thermotolerans CBS 6340 (strain: CBS 6340)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea
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Genomic context

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See KLTH0F10252g in Genome Data Viewer
Location:
chromosome: F
Exon count:
1
Sequence:
Chromosome: F; NC_013082.1 (882483..884990)

Chromosome F - NC_013082.1Genomic Context describing neighboring genes Neighboring gene KLTH0F10208p Neighboring gene KLTH0F10230p Neighboring gene KLTH0F10274p Neighboring gene KLTH0F10296p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013082.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
KLTH0F10252p
XP_002554648.1
  • similar to uniprot|P33775 Saccharomyces cerevisiae YDL095W PMT1 Transfers mannose residues from dolichyl phosphate-D-mannose to specific serine/threonine residues of proteins in the secretory pathway acts in complex with Pmt2p dolichyl phosphate-D-mannose:protein O- D-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013082.1 Reference assembly

    Range
    882483..884990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002554602.1 → XP_002554648.1  KLTH0F10252p [Lachancea thermotolerans CBS 6340]

    See identical proteins and their annotated locations for XP_002554648.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5DL60
    Conserved Domains (4) summary
    smart00472
    Location:393 → 449
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:28 → 733
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:56 → 299
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:535 → 729
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
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