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inositol-1,4,5-trisphosphate 5-phosphatase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828810, updated on 18-Sep-2024

Summary

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Official Full Name
inositol-1,4,5-trisphosphate 5-phosphatase
Primary source
TAIR:AT4G27020
Locus tag
AT4G27020
See related
Araport:AT4G27020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10M23.360; F10M23_360
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Genomic context

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Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (13568367..13571495, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene polyadenylate-binding protein interacting protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ribosome 60S biogenesis amino-terminal protein Neighboring gene fatty acid desaturase A Neighboring gene EAP30/Vps36 family protein Neighboring gene F-box/RNI-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_118836.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole HDA PubMed 

General protein information

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Preferred Names
inositol-1,4,5-trisphosphate 5-phosphatase
NP_194432.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13568367..13571495 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118836.3 → NP_194432.1  inositol-1,4,5-trisphosphate 5-phosphatase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194432.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V3G5, A0A5S9XWB3, Q9SZ41
Nucleotide Protein
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